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IMP: Allow the ability to download SILVA alignment. - #266

Merged

mikerobeson merged 13 commits into

bokulich-lab:masterfrom

mikerobeson:dl_silva_alignment

Sep 23, 2026

Merged

IMP: Allow the ability to download SILVA alignment.#266
mikerobeson merged 13 commits into
bokulich-lab:masterfrom
mikerobeson:dl_silva_alignment

Commits on Sep 11, 2026
- working draft to pull aligned sequences
  mikerobeson
  committed
  853fe42
- fix minor typos
  mikerobeson
  committed
  3e4d023
Commits on Sep 12, 2026
- tidying up some code in get_silva_data
  mikerobeson
  committed
  a6a9be1
Commits on Sep 14, 2026
- fixing url in retrieve test
  mikerobeson
  committed
  ff6bacf
Commits on Sep 20, 2026
- corrected merge conflicts
  mikerobeson
  committed
  7aefe69
Commits on Sep 21, 2026
- made seq_format options lower case
  mikerobeson
  committed
  66e20bb
Commits on Sep 22, 2026
- added typmap for download_sequences and seq_format, updated help text to highlight deprecation of download_squences
  mikerobeson
  committed
  3b5bed3
Commits on Sep 23, 2026
- DEPR: migrate SILVA sequence format control
  VinzentRisch
  committed
  0252fcc
- Merge branch 'bokulich-lab:master' into dl_silva_alignment
  mikerobeson
  authored
  6c2bd99
- Merge branch 'master' into dl_silva_alignment
  mikerobeson
  committed
  c53d08a
- updated url for test_retrieve_data_from_silva
  mikerobeson
  committed
  ea0d99c
- updated help text for seq-format
  mikerobeson
  committed
  a3904d4
- updated README to include new tutorials.
  mikerobeson
  committed
  fff88ae