Issues

• ENH: add support for FeatureData[LinkedSequence] in filter_seqs_length

  bokulich-lab/RESCRIPt#262 · Filter by author nbokulich opened on Jul 27, 2026
  

• Minimal Instillation errors

  bokulich-lab/RESCRIPt#244 · Filter by author AlexaBennett opened on Oct 29, 2025
  1

• Add deprecation warnings for several actions

  bokulich-lab/RESCRIPt#242 · Filter by author mikerobeson opened on Oct 7, 2025
  6

• ENH: Leverage GitHub API to fetch latest data from PR2, ...

  bokulich-lab/RESCRIPt#241 · Filter by author mikerobeson opened on Sep 29, 2025

• cannot import name 'GenomeApi' from 'ncbi.datasets.openapi'

  bokulich-lab/RESCRIPt#238 · Filter by author colinbrislawn opened on Aug 4, 2025
  1

• ENH: refactor orient-seqs revcomp mode to use vsearch --fastx_revcomp

  enhancementgood first issuehelp wanted
  bokulich-lab/RESCRIPt#224 · Filter by author nbokulich opened on Apr 3, 2025

• ENH: parallelization for orient-reads

  bokulich-lab/RESCRIPt#221 · Filter by author nbokulich opened on Apr 2, 2025

• Update help text for clarity: dereplicate --p-mode super

  bokulich-lab/RESCRIPt#165 · Filter by author mikerobeson opened on Oct 5, 2023

• Remove heavy dependencies

  bokulich-lab/RESCRIPt#163 · Filter by author ebolyen opened on Sep 28, 2023
  7

• Sequence identifier warnings from get-ncbi-data.

  bokulich-lab/RESCRIPt#158 · Filter by author mikerobeson opened on May 10, 2023
  

• ENH: action to get preformatted blast databases

  bokulich-lab/RESCRIPt#135 · Filter by author nbokulich opened on May 17, 2022
  1

• ENH: refactor + parallelize the evaluate-fit-classifier and cross-validate pipelines

  bokulich-lab/RESCRIPt#131 · Filter by author nbokulich opened on Mar 23, 2022

• Migrate transformers, etc... to qiime2/q2-types

  bokulich-lab/RESCRIPt#105 · Filter by author mikerobeson opened on Apr 9, 2021
  4

• CI/BUG: NCBI API rate limit exceeded

  bokulich-lab/RESCRIPt#74 · Filter by author thermokarst opened on Sep 17, 2020

• add length mode to dereplicate?

  bokulich-lab/RESCRIPt#1 · Filter by author nbokulich opened on Apr 29, 2019