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Pull requests: opentargets/gentropy

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Pull requests list

feat: extract shared genomics processing utilities Dataset Feature size-M
#1236 opened Jun 15, 2026 by project-defiant Contributor • Draft
9 tasks
build(deps-dev): update mypy requirement from <1.19,>=1.13 to >=1.13,<2.2 dependencies Pull requests that update a dependency file python Pull requests that update Python code
#1234 opened Jun 15, 2026 by dependabot Bot Loading…
feat!: introduce scoped dependencies Dataset Datasource documentation Improvements or additions to documentation Feature Method size-L Step
#1233 opened Jun 14, 2026 by project-defiant Contributor Loading…
4 tasks done
1
feat(l2g): add LocusToGeneCrossValidationStep for pre-split CV with hyperparameter tuning Feature Method size-XL Step
#1230 opened May 28, 2026 by addramir Contributor • Draft
2 of 5 tasks
13
feat: add FUMA Gene2Func hypergeometric gene-set enrichment method documentation Improvements or additions to documentation Feature Method size-L
#1229 opened May 28, 2026 by xyg123 Contributor Loading…
9 tasks
6
feat(l2g): add dark matter loci filter for training set Dataset Feature size-M Step
#1224 opened May 13, 2026 by addramir Contributor • Draft
18
feat(l2g): add hyperparameter grid search with file-based CV output Dataset Feature Method size-XL Step
#1222 opened May 13, 2026 by addramir Contributor • Draft
7 tasks
6
feat(config): move from hydra to pydantic models
#1221 opened May 12, 2026 by project-defiant Contributor • Draft
9 tasks
feat(l2g): establish a standalone l2g benchmark seed artifact Dataset Datasource Feature size-L Step
#1219 opened May 7, 2026 by project-defiant Contributor Loading…
9 tasks
feat(overlaps): allow multiple overlap strategies Dataset documentation Improvements or additions to documentation Feature Method size-XL Step
#1218 opened Apr 17, 2026 by project-defiant Contributor Loading…
9 tasks
7
feat(train and test sets): expose the paths to save train and test sets during L2G training enhancement New feature or request
#1217 opened Apr 17, 2026 by project-defiant Contributor Loading…
2 of 11 tasks
@project-defiant
4
chore: trigger release process auto-pr Chore Dataset Datasource documentation Improvements or additions to documentation Method size-XL Step
#1211 opened Mar 19, 2026 by github-actions Bot Loading…
chore(deps): bump docker/login-action from 3 to 4 Chore dependencies Pull requests that update a dependency file github_actions Pull requests that update GitHub Actions code size-XS
#1207 opened Mar 9, 2026 by dependabot Bot Loading…
chore(deps): bump docker/setup-buildx-action from 3 to 4 dependencies Pull requests that update a dependency file github_actions Pull requests that update GitHub Actions code
#1206 opened Mar 9, 2026 by dependabot Bot Loading…
chore(deps): bump docker/setup-qemu-action from 3.7.0 to 4.0.0 dependencies Pull requests that update a dependency file github_actions Pull requests that update GitHub Actions code
#1205 opened Mar 9, 2026 by dependabot Bot Loading…
chore: pre-commit autoupdate Chore size-S
#1203 opened Mar 2, 2026 by pre-commit-ci Bot Loading…
chore(deps): bump actions/attest-build-provenance from 3 to 4 dependencies Pull requests that update a dependency file github_actions Pull requests that update GitHub Actions code
#1202 opened Mar 2, 2026 by dependabot Bot Loading…
chore(deps): bump actions/download-artifact from 7 to 8 dependencies Pull requests that update a dependency file github_actions Pull requests that update GitHub Actions code
#1201 opened Mar 2, 2026 by dependabot Bot Loading…
build(deps-dev): update pyparsing requirement from <3.3.0,>=3.1.1 to >=3.1.1,<3.4.0 dependencies Pull requests that update a dependency file python Pull requests that update Python code
#1200 opened Mar 2, 2026 by dependabot Bot Loading…
build(deps): update scikit-learn requirement from <1.8.0,>=1.6.1 to >=1.6.1,<1.9.0 dependencies Pull requests that update a dependency file python Pull requests that update Python code
#1199 opened Mar 2, 2026 by dependabot Bot Loading…
1
build(deps-dev): update mkdocstrings-python requirement from <1.19.0,>=1.12.2 to >=1.12.2,<2.1.0 dependencies Pull requests that update a dependency file python Pull requests that update Python code
#1198 opened Mar 2, 2026 by dependabot Bot Loading…
build(deps): update scipy requirement from <1.16.0,>=1.11.4 to >=1.11.4,<1.18.0 dependencies Pull requests that update a dependency file python Pull requests that update Python code
#1197 opened Mar 2, 2026 by dependabot Bot Loading…
1
feat: adding class for multiple ancestry LD calculation Datasource Feature Method size-XL
#670 opened Jul 4, 2024 by addramir Contributor • Draft
7 of 9 tasks
2
feat: devcontainer development environment documentation Improvements or additions to documentation Feature size-M
#487 opened Feb 12, 2024 by d0choa Collaborator • Draft
6
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