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Fix unnecessary quotes showing up in tsv/csv files #28

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Merged
ferponcem merged 1 commit into from
Aug 5, 2026
Merged

Fix unnecessary quotes showing up in tsv/csv files #28

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13 changes: 3 additions & 10 deletions src/ibc_api/utils.py
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Original file line number Diff line number Diff line change
Expand Up @@ -408,16 +408,9 @@ def _write_file(src_file, dst_file, data):
img = nibabel.gifti.gifti.GiftiImage.from_bytes(data)
nibabel.save(img, dst_file, mode="compat")
elif src_file.endswith(".csv") or src_file.endswith(".tsv"):
# read the data as a dataframe and save it
df = pd.read_csv(io.StringIO(data.decode("utf-8")))
if dst_file.endswith(".csv"):
df.to_csv(dst_file, index=False)
elif dst_file.endswith(".tsv"):
df.to_csv(dst_file, index=False, sep="\t")
else:
raise ValueError(
f"File type not supported for {dst_file}. Only .csv and .tsv are supported."
)
sep = "," if src_file.endswith(".csv") else "\t"
df = pd.read_csv(io.StringIO(data.decode("utf-8")), sep=sep)
df.to_csv(dst_file, index=False, sep=sep)
elif src_file.endswith(".json"):
# read the data as a dictionary and save it
dict_data = json.loads(data.decode("utf-8"))
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