Issues

• NEW: Add a new action, pool-contigs, to join contigs from 1+ samples (SampleData[Contigs]) into one pooled set FeatureData[Contig]

  enhancement
  bokulich-lab/q2-assembly#166 · Filter by author fethalen opened on Aug 27, 2026
  

• Add q2-assembly Integration Tests

  bokulich-lab/q2-assembly#157 · Filter by author VinzentRisch opened on Jun 18, 2026

• BUG: _assemble_spades coassembly path passes incorrect filename to modify_contig_ids

  bug
  bokulich-lab/q2-assembly#153 · Filter by author adamcantor22 opened on Apr 27, 2026

• ENH: move coverage calculation with samtools to a separate action

  enhancement
  Feature

  bokulich-lab/q2-assembly#132 · Filter by author misialq opened on Sep 15, 2025

• BUG: MultiMAGSequencesDirFmt does not have a manifest in index_mags

  bug
  Bug

  bokulich-lab/q2-assembly#66 · Filter by author colinvwood opened on Dec 6, 2023

• evaluate-contigs fails on the most recent QUAST version

  bug
  Bug

  bokulich-lab/q2-assembly#41 · Filter by author misialq opened on Apr 27, 2023
  1

  

• MAINT: update dependencies

  maintenance
  bokulich-lab/q2-assembly#16 · Filter by author misialq opened on Mar 22, 2022
  2