Some of the entities in KB have non-derivable short_forms, that is: KB uses a short_form that cannot be derived again by pdb. Now this may or may not be a problem, but at least I wanted to point it out (I noticed that some datasets in p2.pdb have different short_forms than pdb1).
MATCH (n:Entity) WHERE not n.iri =~ ('.*' + n.short_form) RETURN n.iri, n.short_form LIMIT 250
Results in 40 entities with such discrepancies. To fix this, you would have to:
- Fix the
site: issue in general (URLs don't always have short forms)
- Fix some of the entities manually (for example datasets), by changing the short form to the respective IRI fragment.
Example:
"http://virtualflybrain.org/data/Aso_Rubin_2016" | "AsoRubin2016"
Some of the entities in KB have non-derivable short_forms, that is: KB uses a short_form that cannot be derived again by pdb. Now this may or may not be a problem, but at least I wanted to point it out (I noticed that some datasets in p2.pdb have different short_forms than pdb1).
Results in 40 entities with such discrepancies. To fix this, you would have to:
site:issue in general (URLs don't always have short forms)Example: