Issues

• weighted_mds._smacof_single()'s weighted update is O(n^4) (nested Python loop); should be O(n^2) via the graph Laplacian identity

  llm
  rsagroup/rsatoolbox#495 · Filter by author JonNir1 opened on Sep 22, 2026

• weighted_mds.smacof()'s convergence check uses unweighted stress, breaking SMACOF's monotone-convergence guarantee when weight has zero entries

  llm
  rsagroup/rsatoolbox#494 · Filter by author JonNir1 opened on Sep 22, 2026
  2

• calc_rdm_unbalanced doesn't accept list of noise precision matrices

  rsagroup/rsatoolbox#491 · Filter by author jonathanwehnert opened on Aug 12, 2026
  5

• OpenSSF ScoreCard

  security
  rsagroup/rsatoolbox#483 · Filter by author JasperVanDenBosch opened on Feb 10, 2026

• Windows Installation and Binary Compatibility Issues (Python 3.13/3.14)

  llm
  rsagroup/rsatoolbox#482 · Filter by author HTalNachmani opened on Jan 29, 2026
  4

• Integrating Framed RSA into rsatoolbox

  rsagroup/rsatoolbox#458 · Filter by author johnmarktaylor91 opened on Sep 12, 2025

• Searchlight spheres exclude edge voxels (< instead of <=)

  one-line fixsearchlight
  rsagroup/rsatoolbox#450 · Filter by author alexeperon opened on Jul 28, 2025
  3

• Improved support for behavioural data

  rsagroup/rsatoolbox#432 · Filter by author JasperVanDenBosch opened on Feb 27, 2025

• SingleRdmPlot missing attribute

  rsagroup/rsatoolbox#431 · Filter by author mnlmrc opened on Feb 15, 2025

• np.string_ removed from NumPy 2.0

  rsagroup/rsatoolbox#430 · Filter by author mnlmrc opened on Feb 13, 2025

• Best way to handle signal-dependent RDM covariance matrix?

  rsagroup/rsatoolbox#426 · Filter by author johnmarktaylor91 opened on Dec 10, 2024
  6

• Revise eval_bootstrap functions to create one user facing function

  rsagroup/rsatoolbox#422 · Filter by author HeikoSchuett opened on Oct 17, 2024

• Multiple comparison correction in plot_model_comparison

  rsagroup/rsatoolbox#398 · Filter by author JasperVanDenBosch opened on Jun 25, 2024
  2

• noise_prec_from_unbalanced produces NaN values

  rsagroup/rsatoolbox#389 · Filter by author ndolf opened on Feb 23, 2024
  4

• all_tests doesn't work for bootstrap

  rsagroup/rsatoolbox#379 · Filter by author jkderrick028 opened on Dec 3, 2023
  1

• RDM plot icons: _add_descriptor_icons() group offset scaling is negated

  rsagroup/rsatoolbox#378 · Filter by author JasperVanDenBosch opened on Nov 28, 2023

• load_rdm() to accept file handle

  enhancementgood first issue
  rsagroup/rsatoolbox#373 · Filter by author caiw opened on Nov 22, 2023
  1

• Correlation values could be fisher z-transformed before t-tests?

  rsagroup/rsatoolbox#370 · Filter by author alexeperon opened on Nov 15, 2023
  4

• Color code higher-order categories in RDM and MDS plots

  rsagroup/rsatoolbox#367 · Filter by author JasperVanDenBosch opened on Nov 13, 2023

• Minimum discriminable distance

  rsagroup/rsatoolbox#366 · Filter by author JasperVanDenBosch opened on Nov 13, 2023

• Add noise input to get_searchlight_RDMs function for crossnobis and mahalanobis distance measures

  searchlight
  rsagroup/rsatoolbox#356 · Filter by author alexeperon opened on Oct 26, 2023
  3

• Suptitle for show_rdms

  enhancement
  rsagroup/rsatoolbox#351 · Filter by author caiw opened on Oct 9, 2023

• ValueError rdm1 and rdm2 have different nan positions

  searchlight
  rsagroup/rsatoolbox#347 · Filter by author Jiesong2358 opened on Sep 20, 2023
  5

• calc_rdm_movie can change the type of the observation descriptors

  bug
  rsagroup/rsatoolbox#345 · Filter by author caiw opened on Sep 19, 2023
  2

• Test noise ceiling against chance

  rsagroup/rsatoolbox#332 · Filter by author HeikoSchuett opened on Jul 3, 2023