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Benchmark #36

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Benchmark

Benchmark #36

Manually triggered September 26, 2026 19:47
@aliviahossainaliviahossain
⁠ 6fe837c
feat/openswath-normalization-and-cleanup
Status Success
Total duration 1h 4m 16s
Artifacts 4

benchmark.yml

on: workflow_dispatch
Build OpenMS (Linux, fixed SHA)
56m 0s
Build OpenMS (Linux, fixed SHA)
Build OpenMS with ONNX (ProSE + PeptDeep, fixed SHA)
41m 43s
Build OpenMS with ONNX (ProSE + PeptDeep, fixed SHA)
Smoke benchmark (Comet -> Percolator)
50s
Smoke benchmark (Comet -> Percolator)
OpenSwath DIA benchmark
48s
OpenSwath DIA benchmark
ProSE + PeptDeep ONNX benchmark (pipeline validation)
1m 8s
ProSE + PeptDeep ONNX benchmark (pipeline validation)
ProSE + PeptDeep ONNX benchmark (PXD028735, pipeline validation)
21m 33s
ProSE + PeptDeep ONNX benchmark (PXD028735, pipeline validation)
Render combined report
14s
Render combined report
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Annotations

20 warnings
Build OpenMS with ONNX (ProSE + PeptDeep, fixed SHA)
missing initializer for member ‘OpenMS::IsoelectricPoint::PkaValues::nterm_by_residue’ [-Wmissing-field-initializers]
Build OpenMS with ONNX (ProSE + PeptDeep, fixed SHA)
missing initializer for member ‘OpenMS::IsoelectricPoint::PkaValues::cterm_by_residue’ [-Wmissing-field-initializers]
Build OpenMS with ONNX (ProSE + PeptDeep, fixed SHA)
missing initializer for member ‘OpenMS::IsoelectricPoint::PkaValues::nterm_by_residue’ [-Wmissing-field-initializers]
Build OpenMS with ONNX (ProSE + PeptDeep, fixed SHA)
missing initializer for member ‘OpenMS::IsoelectricPoint::PkaValues::cterm_by_residue’ [-Wmissing-field-initializers]
Build OpenMS with ONNX (ProSE + PeptDeep, fixed SHA)
missing initializer for member ‘OpenMS::IsoelectricPoint::PkaValues::nterm_by_residue’ [-Wmissing-field-initializers]
Build OpenMS with ONNX (ProSE + PeptDeep, fixed SHA)
‘jj’ may be used uninitialized [-Wmaybe-uninitialized]
Build OpenMS with ONNX (ProSE + PeptDeep, fixed SHA)
‘bool boost::process::v1::child::wait_for(const std::chrono::duration<_Rep1, _Period1>&) [with Rep = long int; Period = std::ratio<1>]’ is deprecated: wait_for is unreliable [-Wdeprecated-declarations]
Build OpenMS with ONNX (ProSE + PeptDeep, fixed SHA)
‘bool boost::process::v1::child::wait_for(const std::chrono::duration<_Rep1, _Period1>&) [with Rep = long int; Period = std::ratio<1>]’ is deprecated: wait_for is unreliable [-Wdeprecated-declarations]
Build OpenMS with ONNX (ProSE + PeptDeep, fixed SHA)
‘bool boost::process::v1::child::wait_for(const std::chrono::duration<_Rep1, _Period1>&) [with Rep = long int; Period = std::ratio<1>]’ is deprecated: wait_for is unreliable [-Wdeprecated-declarations]
Build OpenMS with ONNX (ProSE + PeptDeep, fixed SHA)
‘bool boost::process::v1::child::wait_for(const std::chrono::duration<_Rep1, _Period1>&) [with Rep = long int; Period = std::ratio<1>]’ is deprecated: wait_for is unreliable [-Wdeprecated-declarations]
Build OpenMS (Linux, fixed SHA)
missing initializer for member ‘OpenMS::IsoelectricPoint::PkaValues::nterm_by_residue’ [-Wmissing-field-initializers]
Build OpenMS (Linux, fixed SHA)
missing initializer for member ‘OpenMS::IsoelectricPoint::PkaValues::cterm_by_residue’ [-Wmissing-field-initializers]
Build OpenMS (Linux, fixed SHA)
missing initializer for member ‘OpenMS::IsoelectricPoint::PkaValues::nterm_by_residue’ [-Wmissing-field-initializers]
Build OpenMS (Linux, fixed SHA)
missing initializer for member ‘OpenMS::IsoelectricPoint::PkaValues::cterm_by_residue’ [-Wmissing-field-initializers]
Build OpenMS (Linux, fixed SHA)
missing initializer for member ‘OpenMS::IsoelectricPoint::PkaValues::nterm_by_residue’ [-Wmissing-field-initializers]
Build OpenMS (Linux, fixed SHA)
‘jj’ may be used uninitialized [-Wmaybe-uninitialized]
Build OpenMS (Linux, fixed SHA)
‘bool boost::process::v1::child::wait_for(const std::chrono::duration<_Rep1, _Period1>&) [with Rep = long int; Period = std::ratio<1>]’ is deprecated: wait_for is unreliable [-Wdeprecated-declarations]
Build OpenMS (Linux, fixed SHA)
‘bool boost::process::v1::child::wait_for(const std::chrono::duration<_Rep1, _Period1>&) [with Rep = long int; Period = std::ratio<1>]’ is deprecated: wait_for is unreliable [-Wdeprecated-declarations]
Build OpenMS (Linux, fixed SHA)
‘bool boost::process::v1::child::wait_for(const std::chrono::duration<_Rep1, _Period1>&) [with Rep = long int; Period = std::ratio<1>]’ is deprecated: wait_for is unreliable [-Wdeprecated-declarations]
Build OpenMS (Linux, fixed SHA)
‘bool boost::process::v1::child::wait_for(const std::chrono::duration<_Rep1, _Period1>&) [with Rep = long int; Period = std::ratio<1>]’ is deprecated: wait_for is unreliable [-Wdeprecated-declarations]

Artifacts

Produced during runtime
Name Size Digest
benchmark-openswath-e4b9609c95cac0c64b7d991d0c047d5fac2c7a27
19.7 KB
sha256:96b047bfe1727c451e54dbaa7029ab5f5a5b9aa30d30bd26b1771ec6711e2456
benchmark-prose-e4b9609c95cac0c64b7d991d0c047d5fac2c7a27
934 KB
sha256:edfcf6c8aaaa7464254f49dd91a9b75152897c5588acf3a143770ccd4a093e8a
benchmark-report-e4b9609c95cac0c64b7d991d0c047d5fac2c7a27
3.39 KB
sha256:c67fb2e6f532230745fb852fdebfc488e70f3a5981b0a5166cced30f6704204d
benchmark-results-e4b9609c95cac0c64b7d991d0c047d5fac2c7a27
11.2 KB
sha256:7056fa5eadc3447a8cfb0d9dd7d4ac242b7aca3672e254755587cac2c154fd92